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- Acyrthosiphon pisum (Pea aphid)
- Adiantum capillus-veneris (Maidenhair fern)
- Aedes aegypti (Yellowfever mosquito) (Culex aegypti)
- Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
- Ailuropoda melanoleuca (Giant panda)
- Anopheles stephensi (Indo-Pakistan malaria mosquito)
- Aotus nancymaae (Ma's night monkey)
- Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress)
- Arabidopsis thaliana (Mouse-ear cress)*
- Argopecten irradians (Bay scallop) (Aequipecten irradians)
- Arthrospira platensis (Spirulina platensis)
- Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (Yeast) (Eremothecium gossypii)
- Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)
- Bacillus anthracis
- Bacillus subtilis (strain 168)
- Bos taurus (Bovine)
- Branchiostoma belcheri (Amphioxus)
- Brassica oleracea var. oleracea
- Caenorhabditis elegans
- Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis)
- Callithrix jacchus (White-tufted-ear marmoset)
- Capra hircus (Goat)
- Cavia porcellus (Guinea pig)
- Cercocebus atys (Sooty mangabey) (Cercocebus torquatus atys)
- Chlamydomonas reinhardtii (Chlamydomonas smithii)
- Chlorocebus sabaeus (Green monkey) (Cercopithecus sabaeus)
- Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
- Columba livia (Rock dove)
- Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025)
- Coturnix japonica (Japanese quail) (Coturnix coturnix japonica)
- Cydia pomonella (Codling moth)
- Danaus plexippus (Monarch butterfly)
- Danio rerio (Zebrafish) (Brachydanio rerio)
- Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
- Desmodus rotundus (Vampire bat)
- Drosophila melanogaster (Fruit fly)*
- Enteroctopus dofleini (North Pacific giant octopus) (Octopus dofleini)
- Equus caballus (Horse)
- Erithacus rubecula (European robin)
- Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks)
- Escherichia coli (strain K12 / DH10B)
- Escherichia coli (strain K12 / MC4100 / BW2952)
- Escherichia coli (strain K12)
- Escherichia coli (strain SE11)
- Escherichia coli (strain SMS-3-5 / SECEC)
- Escherichia coli O127:H6 (strain E2348/69 / EPEC)
- Escherichia coli O139:H28 (strain E24377A / ETEC)
- Escherichia coli O157:H7
- Escherichia coli O157:H7 (strain EC4115 / EHEC)
- Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
- Escherichia coli O8 (strain IAI1)
- Escherichia coli O9:H4 (strain HS)
- Euglena gracilis
- Felis catus (Cat) (Felis silvestris catus)
- Gaeumannomyces tritici (strain R3-111a-1) (Wheat and barley take-all root rot fungus) (Gaeumannomyces graminis var. tritici)
- Gallus gallus (Chicken)
- Geobacillus stearothermophilus (Bacillus stearothermophilus)
- Gibberella fujikuroi (Bakanae and foot rot disease fungus) (Fusarium fujikuroi)
- Gorilla gorilla gorilla (Western lowland gorilla)
- Guillardia theta (strain CCMP2712) (Cryptophyte)
- Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
- Halobacterium halobium (strain shark)
- Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
- Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium)
- Halobacterium sp. (strain aus-2)
- Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
- Halorubrum xinjiangense
- Hasarius adansoni
- Helicobacter pylori (strain G27)
- Helicoverpa assulta (Oriental tobacco budworm) (Heliothis assulta)
- Holotrichia oblita (Chafer beetle)
- Homo sapiens (Human)*
- Hylobates lar (Common gibbon) (White-handed gibbon)
- Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
- Iguana iguana (Common iguana)
- Lactococcus lactis subsp. cremoris (strain MG1363)
- Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis)
- Latimeria chalumnae (Coelacanth)
- Lepisosteus oculatus (Spotted gar)
- Lethenteron camtschaticum (Japanese lamprey) (Lampetra japonica)
- Listeria monocytogenes serotype 4a (strain M7)
- Loxodonta africana (African elephant)
- Macaca fascicularis (Crab-eating macaque) (Cynomolgus monkey)
- Macaca mulatta (Rhesus macaque)
- Macaca nemestrina (Pig-tailed macaque)
- Mandrillus leucophaeus (Drill) (Papio leucophaeus)
- Marchantia polymorpha (Liverwort) (Marchantia aquatica)
- Mastigocladus laminosus (Fischerella sp.)
- Mesocricetus auratus (Golden hamster)
- Mesostigma viride (Green alga)
- Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
- Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) (Methanobacterium thermoautotrophicum)
- Monodelphis domestica (Gray short-tailed opossum)
- Mus musculus (Mouse)*
- Mus musculus domesticus (western European house mouse)
- Mustela putorius furo (European domestic ferret) (Mustela furo)
- Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
- Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
- Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
- Natronomonas pharaonis (Natronobacterium pharaonis)
- Neurospora crassa
- Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
- Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)
- Odocoileus virginianus virginianus (Virginia white-tailed deer)
- Oncorhynchus masou (Cherry salmon) (Masu salmon)
- Ornithorhynchus anatinus (Duckbill platypus)
- Oryctolagus cuniculus (Rabbit)
- Oryza sativa subsp. japonica (Rice)
- Oryzias latipes (Japanese rice fish) (Japanese killifish)
- Ostrinia furnacalis (Asian corn borer)
- Ostrinia nubilalis (European corn borer) (Pyralis nubilalis)
- Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby)
- Ovis aries (Sheep)
- Pan paniscus (Pygmy chimpanzee) (Bonobo)
- Pan troglodytes (Chimpanzee)
- Papio anubis (Olive baboon)
- Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)
- Petromyzon marinus (Sea lamprey)
- Polysiphonia urceolata (Red alga) (Conferva urceolata)
- Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)
- Porphyridium purpureum (Red alga) (Porphyridium cruentum)
- Potorous tridactylus (Potoroo)
- Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
- Rattus norvegicus (Rat)*
- Rhinopithecus bieti (Black snub-nosed monkey) (Pygathrix bieti)
- Rhizobium etli (strain CFN 42 / ATCC 51251)
- Rhodobacter sphaeroides
- Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
- Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
- Saimiri boliviensis (Bolivian squirrel monkey)
- Salmonella typhimurium
- Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
- Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
- Sciurus carolinensis (Eastern gray squirrel)
- Shigella sonnei (strain Ss046)
- Sinapis alba (White mustard) (Brassica hirta)
- Staphylococcus aureus (strain bovine RF122 / ET3-1)
- Staphylococcus aureus (strain COL)
- Staphylococcus aureus (strain JH1)
- Staphylococcus aureus (strain JH9)
- Staphylococcus aureus (strain MRSA252)
- Staphylococcus aureus (strain MSSA476)
- Staphylococcus aureus (strain Mu3 / ATCC 700698)
- Staphylococcus aureus (strain Mu50 / ATCC 700699)
- Staphylococcus aureus (strain MW2)
- Staphylococcus aureus (strain N315)
- Staphylococcus aureus (strain NCTC 8325 / PS 47)
- Staphylococcus aureus (strain Newman)
- Staphylococcus aureus (strain USA300)
- Streptococcus pyogenes
- Streptomyces albus G
- Streptomyces griseus
- Sus scrofa (Pig)
- Sylvia borin (Garden warbler)
- Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
- Synechocystis sp. (strain PCC 6803 / Kazusa)
- Taeniopygia guttata (Zebra finch) (Poephila guttata)
- Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
- Thermosynechococcus elongatus (strain BP-1)
- Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
- Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
- Todarodes pacificus (Japanese flying squid) (Ommastrephes pacificus)
- Torpedo marmorata (Marbled electric ray)
- Uta stansburiana (Side-blotched lizard)
- Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
- Volvox carteri f. nagariensis
- Xenopus laevis (African clawed frog)
- Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
- Yersinia pestis
- Zea mays (Maize)
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